\HeaderA{init.read.exp}{Reads the Output of the Computed Statistics}{init.read.exp}
\keyword{file}{init.read.exp}
\begin{Description}\relax
Function displays the 30 measurements computed by the program Spot for
each gene in the slide being considered.
\end{Description}
\begin{Usage}
\begin{verbatim}
init.read.exp(batch, imageid, sep="\t", header=TRUE, ...)\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{batch}] batch name of the experiment
\item[\code{imageid}] integer value; the index of the slide which is considered
\item[\code{sep}] the field separator character; the columns of the file
will be separated by this character.
\item[\code{header}] a logical value indicating whether the file contains the
names of the variables as its first line.
\item[\code{...}] graphical parameters may also be supplied as arguments to
the function (see \code{\LinkA{par}{par}}).
\end{ldescription}
\end{Arguments}
\begin{Value}
A matrix containing the 30 columns of computed measurements,
corresponding to the rows of different genes in the specified
slide. \\ Details regarding these measurements can be found at
\url{http://www.cmis.csiro.au/iap/Spot/spotoutput.htm}.
\end{Value}
\begin{Section}{Warning}
The code in the example is not directly executable as
it draws upon a particular set of data. This data may be downloaded from
\url{http://www.stat.berkeley.edu/users/terry/zarray/Software/smacode.html}
and when loaded appropriately into the user's directory, this
example should be executable in its current form.
\end{Section}
\begin{Author}\relax
Yee Hwa Yang, \email{yeehwa@stat.berkeley.edu}
\end{Author}
\begin{References}\relax
Spot manual
\url{http://www.cmis.csiro.au/iap/Spot/spotmanual.htm}
\end{References}
\begin{Examples}
\begin{ExampleCode}
## apoa1.info <- init.read.exp("apoa1", 1) ## obtains the matrix
## of 30 measurements for all the genes spotted on slide 1 of the MouseArray
## experiment.\end{ExampleCode}
\end{Examples}

