| Function | Description |
| affxparserInfo | Overview of the Affxparser package. |
| read.affybatch2 | Read CEL files into an Affybatch |
| read.cdf.complete | Parsing a CDF file using Affymetrix Fusion SDK |
| read.cdf.env | Creating an CDF environment using teh Fusion SDK |
| read.cdf.header | Reads the header associated with an Affymetrix CDF file |
| read.cel.complete | Parsing an Affymetrix CEL file |
| read.cel.header | Parsing the header of an Affymetrix CEL file |
| read.cel.intensities | Reads the intensities contained in several Affymetrix CEL files |