Package: RLMM
Description: A classification algorithm, based on a multi-chip,
multi-SNP approach for Affymetrix SNP arrays. Using a large
training sample where the genotype labels are known, this
aglorithm will obtain more accurate classification results on
new data. RLMM is based on a robust, linear model and uses the
Mahalanobis distance for classification. The chip-to-chip
non-biological variation is removed through normalization. This
model-based algorithm captures the similarities across genotype
groups and probes, as well as thousands other SNPs for accurate
classification. NOTE: 100K-Xba only at for now.
Version: 0.8.0
Author: Nusrat Rabbee , Gary Wong
Maintainer: Nusrat Rabbee
Dependencies: R (>= 2.1.0), MASS
Suggests: None
SystemRequirements: Internal files Xba.CQV, Xba.regions (or other
regions file)
License: LGPL version 2 or newer
URL: http://www.stat.berkeley.edu/users/nrabbee/RLMM
Function Descriptions
Source package download
Win32 package download