| Function | Description |
| chiptype.pdnn.params | Chip-type specific data |
| expressopdnn | Position Dependant Nearest Neighbors model for affy |
| find.params.pdnn | A function to find the experiment specific PDNN parameters |
| generateExprVal.method.pdnn | Compute PM correction and summary expression value |
| matplotProbesPDNN | Plot the PDNN computed probe intensities |
| pdnn.params.chiptype | A function to fit PDNN parameters |
| transform.ProbeSet | A function to tranform a ProbeSet |