| Function | Description |
| binning | Binning the Mass Spectrometry Data |
| bslnoff | Baseline Substraction |
| gelmap | Plot the image of a set of spectra |
| getMzs | Extract M/Z values from the biomarker dataframe. |
| getPeaks | Peak Detection |
| intg | Integration |
| isPeak | Locate Peaks in a Spectrum |
| lnn | Estimate Signal and Variation of a Spectrum |
| peaks | Peak Detection |
| pk2bmkr | Find Biomarkers. |
| quality | Quality Check on a Set of Spectra |
| read.files | Read a Spectrum from a Comma Deliminated File |
| renorm | Renormalize Spectra |
| rmBaseline | Batch Baseline Subtraction. |
| specZoom | Plotting a Spectrum with Peaks |