| Function | Description |
| affectationGNL | Label Assignment |
| array1 | Bladder cancer CGH data |
| arrayCGH | Object of Class arrayCGH |
| arrayPersp | Perspective image of microarray spots statistic |
| arrayPlot | Spatial image of microarray spots statistic |
| chrBreakpoints | Chromosomal breakpoints detection |
| cluster | Optimal number of cluster |
| ColorBar | Calibration bar for color images |
| detectOutliers | Outliers detection |
| findCluster | Clustering of genomic regions |
| glad | Analysis of array CGH data |
| gm00143 | Public CGH data of Snijders |
| hclustglad | Hierarchical Clustering |
| kernelpen | Kernelpen function |
| myPalette | Microarray color palette |
| profileCGH | Objects of Class profileCGH and profileChr |
| removeBreakpoints | Remove breakpoints |