\Header{qualRefTable}{General hybridization quality score scaling table}
\keyword{programming}{qualRefTable}
\begin{Description}\relax
This function helps you scale quality measures in order
to compare them on the same plot. It is used on reference slides to
create a look-up table, which will be used to scale other slides.
\end{Description}
\begin{Usage}
\begin{verbatim}qualRefTable(fnames = NULL, path = ".")
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{fnames}] A "character" string naming the input files.
\item[\code{path}] A "character" string representing the data directory. By
default this is set to the current working directory (".").
\end{ldescription}
\end{Arguments}
\begin{Value}
A matrix containing the mean and iqr for tested slides.
\end{Value}
\begin{Author}\relax
Agnes Paquet
\end{Author}
\begin{SeeAlso}\relax
\code{\Link{gpQuality}}, \code{\Link{globalQuality}},
\code{\Link{qualBoxplot}}, \code{\Link{MmScalingTable}}
\end{SeeAlso}

