..

ABAEnrichment/

ABSSeq/

ADaCGH2/

ALDEx2/

AMOUNTAIN/

ANF/

ASAFE/

ASEB/

ASGSCA/

ASICS/

ASSET/

ASpli/

AUCell/

AffyRNADegradation/

AllelicImbalance/

AnalysisPageServer/

Anaquin/

AneuFinder/

AnnotationDbi/

AnnotationFilter/

AnnotationForge/

AnnotationFuncs/

AnnotationHub/

AnnotationHubData/

ArrayExpressHTS/

BAGS/

BASiCS/

BBCAnalyzer/

BEARscc/

BEclear/

BLMA/

BPRMeth/

BSgenome/

BUMHMM/

BUS/

BaalChIP/

BadRegionFinder/

BaseSpaceR/

BasicSTARRseq/

BatchQC/

BayesKnockdown/

BeadDataPackR/

BgeeDB/

BiFET/

BiGGR/

BiRewire/

BioCor/

BioNetStat/

BioQC/

Biobase/

BiocCheck/

BiocFileCache/

BiocInstaller/

BiocParallel/

BiocStyle/

BiocWorkflowTools/

Biostrings/

BitSeq/

BridgeDbR/

BrowserViz/

BubbleTree/

CAFE/

CAGEfightR/

CAGEr/

CAMERA/

CATALYST/

CFAssay/

CGEN/

CHRONOS/

CINdex/

CNAnorm/

CNEr/

CNORfeeder/

CNORfuzzy/

CNORode/

CNVPanelizer/

CODEX/

COMPASS/

CONFESS/

COSNet/

CRISPRseek/

CancerInSilico/

CancerMutationAnalysis/

CancerSubtypes/

Cardinal/

Category/

CellMapper/

CellNOptR/

ChAMP/

ChIPComp/

ChIPQC/

ChIPSeqSpike/

ChIPanalyser/

ChIPexoQual/

ChIPpeakAnno/

ChIPseeker/

ChemmineOB/

ChemmineR/

Chicago/

ClassifyR/

Clomial/

ClusterJudge/

ClusterSignificance/

CoGAPS/

CompGO/

ComplexHeatmap/

ConsensusClusterPlus/

CopywriteR/

CountClust/

CrispRVariants/

CytoDx/

CytoML/

DAPAR/

DART/

DChIPRep/

DEComplexDisease/

DEFormats/

DEGraph/

DEGreport/

DEGseq/

DEP/

DEScan2/

DESeq/

DESeq2/

DEXSeq/

DEsingle/

DEsubs/

DMCHMM/

DMRScan/

DMRcaller/

DMRcate/

DMRforPairs/

DNABarcodes/

DNAshapeR/

DOQTL/

DOSE/

DRIMSeq/

DSS/

DaMiRseq/

DeepBlueR/

DiffBind/

Director/

DominoEffect/

Doscheda/

DropletUtils/

EBImage/

EBSeq/

EBSeqHMM/

EDASeq/

EDDA/

EGAD/

EGSEA/

EMDomics/

ENCODExplorer/

ENmix/

EasyqpcR/

EmpiricalBrownsMethod/

EnrichedHeatmap/

EnrichmentBrowser/

EpiDISH/

EventPointer/

ExiMiR/

ExperimentHub/

ExperimentHubData/

ExpressionAtlas/

FELLA/

FGNet/

FISHalyseR/

FRGEpistasis/

FamAgg/

FindMyFriends/

FitHiC/

FlowRepositoryR/

FlowSOM/

FunChIP/

FunciSNP/

GA4GHclient/

GARS/

GAprediction/

GDCRNATools/

GDSArray/

GEM/

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GENIE3/

GEOquery/

GGBase/

GGtools/

GISPA/

GOSemSim/

GOexpress/

GOfuncR/

GOpro/

GOsummaries/

GRENITS/

GRmetrics/

GRridge/

GSALightning/

GSAR/

GSCA/

GSEABase/

GSEABenchmarkeR/

GSRI/

GSVA/

GUIDEseq/

GWASTools/

GateFinder/

GenRank/

GenVisR/

GeneAnswers/

GeneBreak/

GeneGeneInteR/

GeneNetworkBuilder/

GeneStructureTools/

GeneticsPed/

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GenomicFiles/

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GenomicTuples/

Genominator/

Glimma/

GoogleGenomics/

GraphPAC/

GreyListChIP/

Guitar/

Gviz/

HDTD/

HIBAG/

HTSFilter/

HTSeqGenie/

HTqPCR/

Harman/

Heatplus/

HelloRanges/

HiCcompare/

HiTC/

HilbertCurve/

IMAS/

IMPCdata/

INPower/

INSPEcT/

IONiseR/

IPO/

IRanges/

ISoLDE/

IVAS/

IWTomics/

IdeoViz/

Imetagene/

ImmuneSpaceR/

ImpulseDE/

ImpulseDE2/

InPAS/

InTAD/

IntEREst/

InterMineR/

InteractionSet/

IrisSpatialFeatures/

IsoformSwitchAnalyzeR/

JASPAR2018/

JunctionSeq/

KEGGREST/

KEGGgraph/

KEGGlincs/

KEGGprofile/

LEA/

LINC/

LOBSTAHS/

LOLA/

LPE/

LVSmiRNA/

LedPred/

LineagePulse/

Linnorm/

Logolas/

LowMACA/

LymphoSeq/

M3C/

M3D/

M3Drop/

MACPET/

MADSEQ/

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MAIT/

MANOR/

MAST/

MBASED/

MBAmethyl/

MBttest/

MEAL/

MEIGOR/

MGFM/

MGFR/

MIGSA/

MIMOSA/

MIRA/

MLInterfaces/

MLP/

MLSeq/

MODA/

MSGFgui/

MSGFplus/

MSnID/

MSnbase/

MSstats/

MSstatsQC/

MSstatsQCgui/

MWASTools/

MatrixRider/

MaxContrastProjection/

MeSHDbi/

Mergeomics/

MetCirc/

MetaGxOvarian/

MetaNeighbor/

Metab/

MetaboSignal/

MethylAid/

MethylMix/

MinimumDistance/

Mirsynergy/

MoonlightR/

MotifDb/

Mulcom/

MultiAssayExperiment/

MultiDataSet/

MultiMed/

MutationalPatterns/

NGScopy/

NOISeq/

NTW/

NanoStringDiff/

NanoStringQCPro/

NarrowPeaks/

NetPathMiner/

OPWeight/

ORFik/

OSAT/

OmaDB/

OmicsMarkeR/

Onassis/

OncoScore/

OncoSimulR/

Organism.dplyr/

OrganismDbi/

Oscope/

PAA/

PANR/

PECA/

PGA/

PICS/

PING/

PPInfer/

PSEA/

PWMEnrich/

PanVizGenerator/

Path2PPI/

PathoStat/

PathwaySplice/

Pbase/

PhenStat/

Pi/

Pigengene/

PowerExplorer/

Prize/

ProCoNA/

Prostar/

ProtGenerics/

ProteomicsAnnotationHubData/

PureCN/

QDNAseq/

QUALIFIER/

QUBIC/

QuartPAC/

QuasR/

QuaternaryProd/

R3CPET/

R453Plus1Toolbox/

R4RNA/

RBGL/

RCAS/

RCy3/

RCyjs/

RDAVIDWebService/

REMP/

RGMQL/

RGSEA/

RGraph2js/

RIPSeeker/

RITAN/

RIVER/

RJMCMCNucleosomes/

RNASeqPower/

RNAdecay/

RNAprobR/

ROTS/

ROntoTools/

RPA/

RProtoBufLib/

RRHO/

RSeqAn/

RTCA/

RTCGA/

RTCGAToolbox/

RTN/

RTNduals/

RTNsurvival/

RUVSeq/

RUVcorr/

RUVnormalize/

RVS/

RaggedExperiment/

RamiGO/

Rariant/

Rbowtie/

Rbowtie2/

Rcade/

RchyOptimyx/

RcisTarget/

Rcpi/

ReQON/

ReactomePA/

RedeR/

RefNet/

ReportingTools/

Rgraphviz/

Rhdf5lib/

Rhtslib/

RiboProfiling/

Risa/

RnBeads/

RnaSeqSampleSize/

Rnits/

Roleswitch/

RpsiXML/

Rqc/

Rsamtools/

Rsubread/

S4Vectors/

SANTA/

SBMLR/

SC3/

SCAN.UPC/

SCnorm/

SDAMS/

SEPIRA/

SGSeq/

SIAMCAT/

SICtools/

SIMAT/

SIMLR/

SISPA/

SMITE/

SNPRelate/

SNPediaR/

SNPhood/

SPEM/

SPLINTER/

SPONGE/

SRAdb/

SSPA/

STAN/

STATegRa/

SVAPLSseq/

SVM2CRM/

SWATH2stats/

Scale4C/

SemDist/

SeqArray/

SeqGSEA/

SeqSQC/

SeqVarTools/

ShortRead/

SigCheck/

SingleCellExperiment/

SomaticSignatures/

SpacePAC/

SparseSignatures/

SpidermiR/

StarBioTrek/

SummarizedExperiment/

Sushi/

TCC/

TCGAbiolinks/

TCGAbiolinksGUI/

TCGAutils/

TEQC/

TFARM/

TFBSTools/

TFEA.ChIP/

TFutils/

TIN/

TMixClust/

TPP/

TRONCO/

TSRchitect/

TVTB/

TarSeqQC/

TargetScore/

TargetSearch/

TissueEnrich/

TitanCNA/

TnT/

ToPASeq/

TransView/

Trendy/

TurboNorm/

TxRegInfra/

UNDO/

UniProt.ws/

Uniquorn/

VanillaICE/

VariantAnnotation/

VariantFiltering/

VariantTools/

XBSeq/

XDE/

YAPSA/

a4/

a4Base/

a4Classif/

a4Core/

a4Preproc/

a4Reporting/

acde/

adaptest/

affxparser/

affy/

affyPara/

affycoretools/

alpine/

alsace/

ampliQueso/

amplican/

anamiR/

annmap/

annotate/

annotationTools/

annotatr/

anota/

anota2seq/

antiProfiles/

apeglm/

aroma.light/

arrayQualityMetrics/

attract/

bacon/

ballgown/

bamsignals/

basecallQC/

bcSeq/

beachmat/

beadarray/

bigmelon/

bigmemoryExtras/

bioCancer/

bioassayR/

biobroom/

biocViews/

biomaRt/

biomformat/

biomvRCNS/

biosigner/

biosvd/

biotmle/

biovizBase/

birta/

blima/

bnbc/

branchpointer/

bsseq/

bumphunter/

caOmicsV/

canceR/

categoryCompare/

cbaf/

ccfindR/

ccrepe/

cellGrowth/

cellbaseR/

cellity/

charm/

chimera/

chimeraviz/

chipenrich/

chroGPS/

chromDraw/

chromPlot/

chromVAR/

chromstaR/

chromswitch/

cisPath/

cleanUpdTSeq/

cleaver/

clonotypeR/

clustComp/

clusterExperiment/

clusterProfiler/

coGPS/

coMET/

cobindR/

codelink/

coexnet/

cogena/

compEpiTools/

compcodeR/

consensusSeekeR/

contiBAIT/

conumee/

copynumber/

coseq/

cosmiq/

covRNA/

cpvSNP/

cqn/

crisprseekplus/

crlmm/

csaw/

cummeRbund/

customProDB/

cydar/

cytofkit/

dSimer/

dada2/

dagLogo/

dcGSA/

ddPCRclust/

debrowser/

decontam/

deepSNV/

deltaGseg/

derfinder/

derfinderHelper/

derfinderPlot/

destiny/

diffHic/

diffcoexp/

diffcyt/

diffloop/

diffuStats/

diggit/

discordant/

dks/

dmrseq/

doppelgangR/

drawProteins/

dupRadar/

easyRNASeq/

edge/

edgeR/

eiR/

ensemblVEP/

ensembldb/

epiNEM/

epivizr/

epivizrChart/

epivizrData/

epivizrServer/

epivizrStandalone/

erccdashboard/

esATAC/

esetVis/

eudysbiome/

exomeCopy/

exomePeak/

fCCAC/

fabia/

facopy/

fgsea/

flagme/

flipflop/

flowAI/

flowBeads/

flowBin/

flowCL/

flowClust/

flowCore/

flowDensity/

flowFP/

flowMap/

flowPloidy/

flowQB/

flowStats/

flowType/

flowViz/

flowWorkspace/

flowcatchR/

fmcsR/

focalCall/

frma/

funtooNorm/

gCMAP/

gCMAPWeb/

gCrisprTools/

gQTLstats/

gage/

garfield/

gaucho/

gcapc/

gcrma/

gdsfmt/

geNetClassifier/

geecc/

genbankr/

geneAttribution/

geneClassifiers/

geneXtendeR/

genefilter/

geneplast/

geneplotter/

genoCN/

genomation/

genomeIntervals/

genoset/

genotypeeval/

genphen/

gep2pep/

ggbio/

ggcyto/

ggtree/

girafe/

globalSeq/

gmapR/

goSTAG/

gprege/

graphite/

groHMM/

gtrellis/

gwascat/

hapFabia/

hiAnnotator/

hiReadsProcessor/

hicrep/

hierGWAS/

hipathia/

hpar/

htSeqTools/

hyperdraw/

iCNV/

iCOBRA/

iCheck/

iClusterPlus/

iGC/

iPAC/

iSEE/

iSeq/

ideal/

illuminaio/

imageHTS/

immunoClust/

intansv/

interactiveDisplayBase/

isobar/

isomiRs/

iterClust/

iteremoval/

kebabs/

kimod/

kissDE/

ldblock/

les/

limma/

lmdme/

loci2path/

lpNet/

lumi/

mAPKL/

mCSEA/

maftools/

manta/

matter/

meshes/

meshr/

messina/

metaMS/

metabomxtr/

metagene/

metagenomeFeatures/

metagenomeSeq/

metaseqR/

metavizr/

methInheritSim/

methimpute/

methyAnalysis/

methylInheritance/

methylKit/

methylPipe/

methyvim/

miRBaseConverter/

miRLAB/

miRNAmeConverter/

miRNApath/

miRNAtap/

miRcomp/

miRmine/

miRsponge/

microbiome/

minfi/

mirIntegrator/

missMethyl/

missRows/

mitoODE/

mogsa/

monocle/

mosaics/

motifStack/

motifcounter/

motifmatchr/

mpra/

msPurity/

msa/

multiClust/

multiOmicsViz/

muscle/

mzID/

mzR/

ncdfFlow/

ndexr/

netReg/

netbenchmark/

netbiov/

nethet/

netprioR/

netresponse/

networkBMA/

nondetects/

normr/

npGSEA/

nucleR/

nucleoSim/

oligo/

oligoClasses/

omicade4/

omicplotR/

omicsPrint/

oncomix/

oneSENSE/

ontoProc/

openCyto/

openPrimeR/

openPrimeRui/

oposSOM/

oppar/

pRoloc/

panelcn.mops/

parody/

pathRender/

pathVar/

pathprint/

pathview/

paxtoolsr/

pbcmc/

pcaExplorer/

pcxn/

pdInfoBuilder/

pepXMLTab/

perturbatr/

phantasus/

philr/

phosphonormalizer/

phyloseq/

piano/

pint/

plethy/

plgem/

plyranges/

pmm/

podkat/

polyester/

powerTCR/

pqsfinder/

prebs/

proBAMr/

proFIA/

procoil/

profileScoreDist/

proteoQC/

psichomics/

psygenet2r/

pwOmics/

qcmetrics/

qpgraph/

qrqc/

qsea/

quantro/

qvalue/

r3Cseq/

rBiopaxParser/

rCGH/

rDGIdb/

rGREAT/

rSFFreader/

rTANDEM/

rTRM/

rTRMui/

rWikiPathways/

rain/

ramwas/

rcellminer/

readat/

recount/

recoup/

regionReport/

regioneR/

regsplice/

restfulSE/

rfPred/

rgsepd/

rhdf5/

rhdf5client/

riboSeqR/

rnaseqcomp/

roar/

rols/

ropls/

rpx/

rqt/

rqubic/

rsbml/

rtracklayer/

runibic/

sampleClassifier/

sapFinder/

scDD/

scFeatureFilter/

scPipe/

scater/

scfind/

scmap/

scmeth/

scone/

scran/

semisup/

seq2pathway/

seqCAT/

seqPattern/

seqTools/

seqcombo/

seqplots/

seqsetvis/

sevenC/

sevenbridges/

shinyMethyl/

shinyTANDEM/

sights/

signeR/

signet/

similaRpeak/

simulatorZ/

sincell/

singleCellTK/

singscore/

slalom/

snm/

soGGi/

specL/

splatter/

spliceR/

spliceSites/

srnadiff/

sscu/

ssviz/

statTarget/

subSeq/

supraHex/

swfdr/

switchde/

synapter/

synergyfinder/

synlet/

systemPipeR/

tRNAscanImport/

tigre/

tofsims/

topdownr/

trackViewer/

tracktables/

transcriptR/

transcriptogramer/

treeio/

trena/

trigger/

triplex/

twoddpcr/

tximport/

uSORT/

unifiedWMWqPCR/

variancePartition/

vidger/

viper/

vsn/

vulcan/

wateRmelon/

wavClusteR/

waveTiling/

wiggleplotr/

xcms/

xps/

yamss/

yaqcaffy/

yarn/

zFPKM/

zinbwave/

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生成于 Thu, 08 Jun 2023 15:47:33 +0000