# Generated by roxygen2: do not edit by hand

export(app_module)
export(app_ui)
export(correlationAnalysis)
export(draw_roc_pr)
export(exprspca)
export(extendMetaData)
export(fillNA)
export(filterRow)
export(getAutoRIF)
export(gsAnnotIdList)
export(multi.t.test)
export(nColors)
export(normalize.nQuantiles)
export(normalize.totsum)
export(normalizeColWise)
export(normalizeData)
export(omicsViewer)
export(plotly_boxplot_module)
export(plotly_boxplot_ui)
export(plotly_scatter_module)
export(plotly_scatter_ui)
export(prepOmicsViewer)
export(readESVObj)
export(read_gmt)
export(removeVarQC)
export(rowshift)
export(saveOmicsViewerDb)
export(triselector_module)
export(triselector_ui)
exportMethods(extendMetaData)
import(Matrix, except = image)
import(matrixStats)
import(plotly)
import(shiny, except = c(dataTableOutput, renderDataTable))
import(shiny, except = c(dataTableOutput, renderDataTable))

import(stringr)
importFrom(Biobase,"fData<-")
importFrom(Biobase,"pData<-")
importFrom(Biobase,AnnotatedDataFrame)
importFrom(Biobase,ExpressionSet)
importFrom(Biobase,exprs)
importFrom(Biobase,fData)
importFrom(Biobase,pData)
importFrom(DT,DTOutput)
importFrom(DT,dataTableOutput)
importFrom(DT,dataTableProxy)
importFrom(DT,datatable)
importFrom(DT,renderDT)
importFrom(DT,renderDataTable)
importFrom(RColorBrewer,brewer.pal)
importFrom(ROCR,performance)
importFrom(ROCR,prediction)
importFrom(RSQLite,SQLite)
importFrom(RSQLite,dbConnect)
importFrom(RSQLite,dbDisconnect)
importFrom(RSQLite,dbGetQuery)
importFrom(RSQLite,dbListTables)
importFrom(RSQLite,dbWriteTable)
importFrom(S4Vectors,DataFrame)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(beeswarm,beeswarm)
importFrom(curl,curl)
importFrom(fastmatch,'%fin%')
importFrom(fastmatch,fmatch)
importFrom(fgsea,fgsea)
importFrom(fgsea,fgseaMultilevel)
importFrom(flatxml,fxml_importXMLFlat)
importFrom(ggplot2,geom_vline)
importFrom(ggseqlogo,ggseqlogo)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,image)
importFrom(graphics,legend)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,text)
importFrom(grid,grid.pretty)
importFrom(httr,GET)
importFrom(httr,POST)
importFrom(httr,content)
importFrom(matrixStats,colCumsums)
importFrom(matrixStats,colQuantiles)
importFrom(matrixStats,colSums2)
importFrom(matrixStats,rowMaxs)
importFrom(matrixStats,rowMins)
importFrom(matrixStats,rowSums2)
importFrom(matrixStats,rowVars)
importFrom(methods,as)
importFrom(methods,is)
importFrom(networkD3,JS)
importFrom(networkD3,forceNetwork)
importFrom(networkD3,forceNetworkOutput)
importFrom(networkD3,renderForceNetwork)
importFrom(openxlsx,addWorksheet)
importFrom(openxlsx,createWorkbook)
importFrom(openxlsx,saveWorkbook)
importFrom(openxlsx,writeData)
importFrom(psych,corr.test)
importFrom(reshape2,melt)
importFrom(shiny,req)
importFrom(shinyWidgets,actionBttn)
importFrom(shinyWidgets,dropdown)
importFrom(shinyWidgets,pickerInput)
importFrom(shinyWidgets,radioGroupButtons)
importFrom(shinyWidgets,switchInput)
importFrom(shinyWidgets,textInputIcon)
importFrom(shinyWidgets,tooltipOptions)
importFrom(shinyWidgets,updatePickerInput)
importFrom(shinyWidgets,updateRadioGroupButtons)
importFrom(shinyWidgets,updateSwitchInput)
importFrom(shinyWidgets,updateTextInputIcon)
importFrom(shinybusy,remove_modal_spinner)
importFrom(shinybusy,show_modal_spinner)
importFrom(shinycssloaders,withSpinner)
importFrom(shinyjs,hidden)
importFrom(shinyjs,useShinyjs)
importFrom(shinythemes,shinytheme)
importFrom(stats,as.dendrogram)
importFrom(stats,as.dist)
importFrom(stats,as.hclust)
importFrom(stats,chisq.test)
importFrom(stats,cor)
importFrom(stats,cor.test)
importFrom(stats,dhyper)
importFrom(stats,dist)
importFrom(stats,fisher.test)
importFrom(stats,hclust)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,phyper)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,t.test)
importFrom(stats,uniroot)
importFrom(stats,wilcox.test)
importFrom(stringr,str_count)
importFrom(stringr,str_match)
importFrom(stringr,str_pad)
importFrom(stringr,str_split_fixed)
importFrom(survival,Surv)
importFrom(survival,survfit)
importFrom(survminer,ggsurvplot)
importFrom(survminer,surv_pvalue)
importFrom(utils,download.file)
importFrom(utils,packageVersion)
importFrom(utils,read.delim)
importFrom(utils,write.table)
