d78e5d4bfb7b395cc500293e255d3365 *CITATION
9811ab29358eaa06abaf0212679728f8 *DESCRIPTION
21dd2c928d17e4f743215ab035394b8d *INDEX
753b861be1bcd84101adfd4f176eccb8 *Meta/Rd.rds
dff0c21365af97a4870480e08afc2958 *Meta/features.rds
bb894f52f29a89802187e876e8f7c592 *Meta/hsearch.rds
ddbd9e15acb6bb1a241fcd9eda42dfbc *Meta/links.rds
5e0fed93ad1710fa1f87de916d2da5a2 *Meta/nsInfo.rds
f1739acd12f3eb5a57404cd9d2df9b49 *Meta/package.rds
adbcbca40b313c7996d042cb66e9c522 *Meta/vignette.rds
37a85b1f3cf564b15792a411834e9aa6 *NAMESPACE
a4fff23b4696800df6623db4395f5d14 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/VariantAnnotation
f36717bf8fc69fc383b7267e2d6e4b90 *R/VariantAnnotation.rdb
eed3ff64b0f61a6cf623371263afcda1 *R/VariantAnnotation.rdx
248f20a154a6e578e1da63a7aab12882 *doc/VariantAnnotation.R
f0718d7188ef8d41ef2896978b203e5b *doc/VariantAnnotation.Rmd
dccee04e170e0504808c24ef16d8c944 *doc/VariantAnnotation.html
61cac9ea36656a4e5e4fbc4dc85cbaf6 *doc/filterVcf.R
9437f0796f440360ce0daffdb87e7cb1 *doc/filterVcf.Rmd
3f1d84b127fb3f756ba430cd7a0e403d *doc/filterVcf.html
c0547429520f49e451e18932ec8393cf *doc/index.html
46e78a67f51161387c4c13aeefe80367 *extdata/chr22.vcf.gz
540ee7e114a2c3c9f9730610940ec47f *extdata/chr22.vcf.gz.tbi
a4ca21413e322997ed17c5429e65b9ca *extdata/chr7-sub.vcf.gz
dc5c0ecc784ff39509a164f3020b72f8 *extdata/chr7-sub.vcf.gz.tbi
b325a60a320b6aebb41d41d1dafb9c6d *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
f2a805083bd71e155f977ffb49df2cd5 *extdata/h1187-10k.vcf.gz
fab30e49f0d054d462f8e1737844b204 *extdata/h1187-10k.vcf.gz.tbi
dac0f427ab59994c11859f2b09bab618 *extdata/hapmap_exome_chr22.vcf.gz
ff0775ab73d21645fa114d487e5ebcfd *extdata/hapmap_exome_chr22.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
501fcaeb307af60841c6b9f4ea7efbe3 *help/AnIndex
efbe67e5088cc754244fbc047d985f86 *help/VariantAnnotation.rdb
3d1ed76298e7d2ea9b9deedd4ef93e5a *help/VariantAnnotation.rdx
e6f7f50ea1c8761812deedf17513eed2 *help/aliases.rds
21182205e24d0d8961d7acb93516240a *help/paths.rds
b7d7f9e67096bab3c5156ec7ea3c8ff4 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
0bdd8c711265579391f07f2c50c7f3a5 *libs/x64/VariantAnnotation.dll
17f1c6f05e7a9ff7756b6efabce3f745 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
9ce56b3cbbb6829d3e3236a106046da0 *unitTests/cases/VarScan_header.vcf
0c5f14796bf4eb3683ceff8e559f43d7 *unitTests/cases/banded_gvcf.vcf
0fbb3e914d7a97208d8d1eb8fcb93026 *unitTests/cases/buffer_realloc.vcf
992d76f76b4634d6ea263b873f92cbac *unitTests/cases/ex1-seq1-90.vcf
4619ce5ed3abf69b38c13f8a72ca9755 *unitTests/cases/expand.vcf
7be3dfdcd77d28fe84fdeb30ea096d58 *unitTests/cases/fewer-FORMAT-than-GENO.vcf
dfc226165c7c64d2e24a1fe952600cdd *unitTests/cases/meta_header.vcf
3d07a0b85a80b389b0ee5ba3dba11b13 *unitTests/cases/missing-FORMAT-metadata-elt.vcf
ba4c3b28d5f63740fda11e70a19eccd7 *unitTests/cases/mixedStructural.vcf
0230db3391a4a664fd5e2236fd0e5a92 *unitTests/cases/multiple_INFO_fields.vcf
752d9d47c17d8f66791ce8804d88dbf6 *unitTests/cases/negative_FORMAT_Number.vcf
39d8ae8aa155e4bac07e9215017143e7 *unitTests/cases/no_FORMAT_column.vcf
4fc8b2f12f8b054e888ce092bb5b5443 *unitTests/cases/no_GENO_row.vcf
a99d3b281abdd928c30fd147de3848a0 *unitTests/cases/no_INFO_header.vcf
0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
0b5b4448b336d5a5b56d18cf818f9712 *unitTests/test_SIFTandPolyPhen.R
d08510e74b080b9d0830a1941740ea90 *unitTests/test_ScanVcfParam-class.R
dedcdc316629cb8661cc893f6d18da0f *unitTests/test_VCF-class.R
f794098e916c49a86454bb58fe55fdb1 *unitTests/test_VRanges-class.R
98f30f7a93c9bb3ea1605f693d02b569 *unitTests/test_expand-methods.R
ad687c9f6717a20333e98db69fe89286 *unitTests/test_filterVcf.R
7c00151d0528b740a94ddb9a8504898a *unitTests/test_genotypeToSnpMatrix.R
2c2205ed5a0c6d352887365ce90f025a *unitTests/test_isSNV.R
5c303ea47fa41a2fcc89f6c834c5d83e *unitTests/test_locateVariants-methods.R
b92e0e7b951b75b850b37d0204efa1f5 *unitTests/test_predictCoding-methods.R
5044be812d16c430cbc3a2451c10eba4 *unitTests/test_readVcf-methods.R
16a5eae70d0e330c6660e94f57fdf32f *unitTests/test_scanVcf.R
e45debe5cc9e5a797032c5ece476a74c *unitTests/test_snpSummary.R
d98bfd1bf44ccafabe740b9ae42d1208 *unitTests/test_summarizeVariants-methods.R
118c0fdfd316bc754c56babc45b3bbdf *unitTests/test_vcfFields.R
d3bb2d2fe3e1d082db457d14f0c9d7e6 *unitTests/test_writeVcf-methods.R
