Package: SummarizedExperiment
Title: SummarizedExperiment container
Description: The SummarizedExperiment container contains one or more assays,
	each represented by a matrix-like object of numeric or other mode.
	The rows typically represent genomic ranges of interest and the columns
	represent samples.
biocViews: Genetics, Infrastructure, Sequencing, Annotation, Coverage,
        GenomeAnnotation
URL: https://bioconductor.org/packages/SummarizedExperiment
BugReports: https://github.com/Bioconductor/SummarizedExperiment/issues
Version: 1.31.1
License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
	person("Martin", "Morgan", role="aut"),
	person("Valerie", "Obenchain", role="aut"),
	person("Jim", "Hester", role="aut"),
	person("Hervé", "Pagès", role=c("aut", "cre"),
		email="hpages.on.github@gmail.com"))
Depends: R (>= 4.0.0), methods, MatrixGenerics (>= 1.1.3),
        GenomicRanges (>= 1.41.5), Biobase
Imports: utils, stats, tools, Matrix, BiocGenerics (>= 0.37.0),
        S4Vectors (>= 0.33.7), IRanges (>= 2.23.9), GenomeInfoDb (>=
        1.13.1), S4Arrays (>= 1.1.1), DelayedArray (>= 0.27.1)
Suggests: HDF5Array (>= 1.7.5), annotate, AnnotationDbi, hgu95av2.db,
        GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene, jsonlite,
        rhdf5, airway (>= 1.15.1), BiocStyle, knitr, rmarkdown, RUnit,
        testthat, digest
VignetteBuilder: knitr
Collate: Assays-class.R SummarizedExperiment-class.R
        RangedSummarizedExperiment-class.R intra-range-methods.R
        inter-range-methods.R coverage-methods.R combine-methods.R
        findOverlaps-methods.R nearest-methods.R
        makeSummarizedExperimentFromExpressionSet.R
        makeSummarizedExperimentFromDataFrame.R
        makeSummarizedExperimentFromLoom.R zzz.R
git_url: https://git.bioconductor.org/packages/SummarizedExperiment
git_branch: devel
git_last_commit: c4a8bd8
git_last_commit_date: 2023-04-30
Date/Publication: 2023-05-04
NeedsCompilation: no
Packaged: 2023-05-05 03:30:01 UTC; biocbuild
Author: Martin Morgan [aut],
  Valerie Obenchain [aut],
  Jim Hester [aut],
  Hervé Pagès [aut, cre]
Maintainer: Hervé Pagès <hpages.on.github@gmail.com>
Built: R 4.3.0; ; 2023-05-05 14:32:46 UTC; windows
