Package: MetaVolcanoR
Type: Package
Title: Gene Expression Meta-analysis Visualization Tool
Version: 1.15.0
Authors@R: c(person("Cesar", "Prada", email = "cesar.prada.medina@gmail.com", 
    role = c("aut", "cre")), person("Diogenes", "Lima", email = "diogenes.lima@alumni.usp.br", 
    role = c("aut")), person("Helder", "Nakaya", email = "hnkaya@usp.br",
    role = c("aut", "ths")))
Description: MetaVolcanoR combines differential gene expression results. 
    It implements three strategies to summarize differential gene expression from 
    different studies. i) Random Effects Model (REM) approach, ii) a p-value 
    combining-approach, and iii) a vote-counting approach. In all cases, 
    MetaVolcano exploits the Volcano plot reasoning to visualize the gene expression
    meta-analysis results.
Depends: R (>= 4.1.1)
Imports: methods, data.table, dplyr, tidyr, plotly, ggplot2, cowplot,
        parallel, metafor, metap, rlang, topconfects, grDevices,
        graphics, stats, htmlwidgets
Suggests: knitr, markdown, rmarkdown, testthat
License: GPL-3
Encoding: UTF-8
biocViews: GeneExpression, DifferentialExpression, Transcriptomics,
        mRNAMicroarray, RNASeq
LazyData: true
roxygennote: 6.1.1.9000
VignetteBuilder: knitr
RoxygenNote: 6.1.1
git_url: https://git.bioconductor.org/packages/MetaVolcanoR
git_branch: devel
git_last_commit: ddd9e47
git_last_commit_date: 2023-04-25
Date/Publication: 2023-05-20
NeedsCompilation: no
Packaged: 2023-05-20 17:45:47 UTC; biocbuild
Author: Cesar Prada [aut, cre],
  Diogenes Lima [aut],
  Helder Nakaya [aut, ths]
Maintainer: Cesar Prada <cesar.prada.medina@gmail.com>
Built: R 4.3.0; ; 2023-05-21 04:06:18 UTC; unix
