GRoperator              GRanges operator
addArrowMark            Add arrow mark to the figure at a given
                        position
addGuideLine            Add guide lines to the tracks
browseTracks            browse tracks
browseTracks-shiny      Shiny bindings for browseTracks
coverageGR              calculate coverage
dandelion.plot          dandelion.plots
geneModelFromTxdb       Prepare gene model from an object of TxDb
geneTrack               track from TxDb
getCurTrackViewport     Get current track viewport
getGeneIDsFromTxDb      get gene ids by genomic location
getLocation             get genomic location by gene symbol
gi2track                convert GInteractions to track object
gieStain                color sheme for the schema for Chromosome Band
                        (Ideogram)
gridPlot                plot GRanges metadata
ideogramPlot            plot ideogram with data
importBam               Reading data from a BAM file
importData              Reading data from a BED or WIG file to RleList
importGInteractions     Reading data from a ginteractions, hic, cool,
                        or validPairs file
importScSeqScore        plot tracks for single cell RNAseq
importScore             Reading data from a BED or WIG file
listChromosomes         List the available chromosome
listResolutions         List the available resolutions
loadIdeogram            load ideogram from UCSC
lolliplot               Lolliplots
optimizeStyle           Optimize the style of plot
parse2GRanges           parse text into GRanges
parseWIG                convert WIG format track to BED format track
plotGInteractions       plot GInteractions
plotGRanges             plot GRanges data
plotIdeo                plot ideogram
plotOneIdeo             plot ideogram with data for one chromosome
pos-class               Class '"pos"'
trackList-class         List of tracks
trackStyle-class        Class '"trackStyle"'
trackViewer-package     Minimal designed plotting tool for genomic data
trackViewerStyle-class
                        Class '"trackViewerStyle"'
viewGene                plot tracks based on gene name
viewTracks              plot the tracks
xscale-class            Class '"xscale"'
yaxisStyle-class        Class '"yaxisStyle"'
