CancerDetector          Cancer Detector
CancerDetector.markers
                        Cancer-specific marker parameter
CancerDetector.reads    Fragment-level methylation state for cancer
                        detection
CpG_OB_demo             Methylation information for CpG on the original
                        bottom strand (OB)
CpG_OT_demo             Methylation information for CpG on the original
                        top strand (OT)
GenerateFragMeth        Generate fragment-level information about
                        methylation states
GenerateMarkerParam     Generate the methylation pattern of markers
MergeCpGs               Generate fragment-level methylation states of
                        CpGs
MergePEReads            Generate fragment-level information for
                        paired-end sequencing reads
beta_matrix             Beta value matrix
cfDeconvolve            cfDNA methylation read deconvolution
cfDeconvolve.markers    Tissue-specific marker parameter
cfDeconvolve.reads      Fragment-level methylation state for tissue
                        deconvolution
demo.fragment_level.meth.bed
                        Fragment-level methylation information
demo.refo_frag.bed      Fragment-level information
demo.refo_meth.bed      Methylation information on fragments
demo.sorted.bed         Paired-end sequencing reads
marker_index            Marker name
markers.bed             Genomic postions of markers
sample_type             Sample type
