Package: VariantTools
Type: Package
Title: Tools for Exploratory Analysis of Variant Calls
Version: 1.42.0
Author: Michael Lawrence, Jeremiah Degenhardt, Robert Gentleman
Maintainer: Michael Lawrence <michafla@gene.com>
Description: Explore, diagnose, and compare variant calls using filters.
Depends: R (>= 3.5.0), S4Vectors (>= 0.17.33), IRanges (>= 2.13.12),
        GenomicRanges (>= 1.31.8), VariantAnnotation (>= 1.11.16),
        methods
Imports: Rsamtools (>= 1.31.2), BiocGenerics, Biostrings, parallel,
        GenomicFeatures (>= 1.31.3), Matrix, rtracklayer (>= 1.39.7),
        BiocParallel, GenomeInfoDb, BSgenome, Biobase
Suggests: RUnit, LungCancerLines (>= 0.0.6), RBGL, graph, gmapR (>=
        1.21.3)
License: Artistic-2.0
LazyLoad: yes
biocViews: Genetics, GeneticVariability, Sequencing
git_url: https://git.bioconductor.org/packages/VariantTools
git_branch: RELEASE_3_17
git_last_commit: 9fc1928
git_last_commit_date: 2023-04-25
Date/Publication: 2023-04-25
NeedsCompilation: no
Packaged: 2023-04-26 05:53:11 UTC; biocbuild
Built: R 4.3.0; ; 2023-04-26 16:35:40 UTC; windows
