# Generated by roxygen2: do not edit by hand

S3method(addMethod,BenchDesign)
S3method(dropMethod,BenchDesign)
S3method(expandMethod,BenchDesign)
S3method(modifyMethod,BenchDesign)
export("BDData<-")
export("BDMethod<-")
export("BDMethodList<-")
export("groundTruths<-")
export("performanceMetrics<-")
export(BDData)
export(BDMethod)
export(BDMethodList)
export(BenchDesign)
export(SummarizedBenchmark)
export(addMethod)
export(addPerformanceMetric)
export(availableMetrics)
export(buildBench)
export(compareBDData)
export(compareBDMethod)
export(compareBenchDesigns)
export(dropMethod)
export(estimateMetricsForAssay)
export(estimatePerformanceMetrics)
export(expandMethod)
export(groundTruths)
export(hashBDData)
export(modifyMethod)
export(performanceMetrics)
export(plotMethodsOverlap)
export(plotROC)
export(printMethod)
export(printMethods)
export(tidyBDMethod)
export(tidyUpMetrics)
export(updateBench)
exportClasses(BDData)
exportClasses(BDMethod)
exportClasses(BDMethodList)
exportClasses(BenchDesign)
exportClasses(SummarizedBenchmark)
exportMethods("BDData<-")
exportMethods("BDMethod")
exportMethods("BDMethod<-")
exportMethods("BDMethodList")
exportMethods("BDMethodList<-")
exportMethods("BenchDesign")
exportMethods("assayNames<-")
exportMethods("groundTruths")
exportMethods("groundTruths<-")
exportMethods("mcols<-")
exportMethods("performanceMetrics")
exportMethods("performanceMetrics<-")
exportMethods(BDMethod)
exportMethods(compareBenchDesigns)
exportMethods(tidyBDMethod)
import(BiocParallel)
import(SummarizedExperiment)
import(dplyr)
importClassesFrom(S4Vectors,SimpleList)
importFrom(BiocGenerics,sd)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,SimpleList)
importFrom(S4Vectors,cor)
importFrom(S4Vectors,elementMetadata)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,params)
importFrom(SummarizedExperiment,cbind)
importFrom(UpSetR,upset)
importFrom(crayon,bold)
importFrom(crayon,green)
importFrom(crayon,red)
importFrom(crayon,yellow)
importFrom(digest,digest)
importFrom(dplyr,as_tibble)
importFrom(dplyr,left_join)
importFrom(ggplot2,aes)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylim)
importFrom(mclust,adjustedRandIndex)
importFrom(methods,.valueClassTest)
importFrom(methods,as)
importFrom(methods,formalArgs)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,slot)
importFrom(methods,validObject)
importFrom(rlang,"!!!")
importFrom(rlang,"!!")
importFrom(rlang,":=")
importFrom(rlang,enquo)
importFrom(rlang,eval_tidy)
importFrom(rlang,flatten)
importFrom(rlang,get_expr)
importFrom(rlang,is_quosure)
importFrom(rlang,is_quosures)
importFrom(rlang,quo)
importFrom(rlang,quo_text)
importFrom(rlang,quos)
importFrom(sessioninfo,session_info)
importFrom(stringr,str_pad)
importFrom(stringr,str_trunc)
importFrom(tibble,is_tibble)
importFrom(tidyr,gather)
importFrom(tidyr,spread)
importFrom(tidyr,unnest)
importFrom(utils,head)
importFrom(utils,packageName)
importFrom(utils,packageVersion)
importMethodsFrom(S4Vectors,"elementMetadata<-")
importMethodsFrom(S4Vectors,"mcols<-")
importMethodsFrom(S4Vectors,elementMetadata)
importMethodsFrom(S4Vectors,mcols)
importMethodsFrom(SummarizedExperiment,"assayNames<-")
importMethodsFrom(SummarizedExperiment,assayNames)
