# Generated by roxygen2: do not edit by hand

export(AUC_of_cross_function)
export(R_BC)
export(average_marker_intensity_within_radius)
export(average_minimum_distance)
export(average_nearest_neighbor_index)
export(average_percentage_of_cells_within_radius)
export(calculate_cell_proportions)
export(calculate_cross_functions)
export(calculate_distance_to_margin)
export(calculate_entropy)
export(calculate_minimum_distances_between_celltypes)
export(calculate_pairwise_distances_between_celltypes)
export(calculate_percentage_of_grids)
export(calculate_proportions_of_cells_in_structure)
export(calculate_spatial_autocorrelation)
export(calculate_summary_distances_between_celltypes)
export(calculate_summary_distances_of_cells_to_borders)
export(composition_of_neighborhoods)
export(compute_gradient)
export(crossing_of_crossK)
export(define_celltypes)
export(define_structure)
export(dimensionality_reduction_plot)
export(entropy_gradient_aggregated)
export(format_cellprofiler_to_spe)
export(format_codex_to_spe)
export(format_colData_to_spe)
export(format_halo_to_spe)
export(format_image_to_spe)
export(format_inform_to_spe)
export(format_spe_to_ppp)
export(grid_metrics)
export(identify_bordering_cells)
export(identify_neighborhoods)
export(image_splitter)
export(marker_intensity_boxplot)
export(marker_prediction_plot)
export(marker_surface_plot)
export(marker_surface_plot_stack)
export(measure_association_to_cell_properties)
export(mixing_score_summary)
export(number_of_cells_within_radius)
export(plot_average_intensity)
export(plot_cell_categories)
export(plot_cell_distances_violin)
export(plot_cell_marker_levels)
export(plot_cell_percentages)
export(plot_composition_heatmap)
export(plot_distance_heatmap)
export(plot_marker_level_heatmap)
export(predict_phenotypes)
export(select_celltypes)
import(SpatialExperiment)
import(dplyr)
import(ggplot2)
importFrom(gridExtra,grid.arrange)
importFrom(spatstat.explore,Gcross)
importFrom(spatstat.explore,Jcross)
importFrom(spatstat.explore,Kcross)
importFrom(spatstat.explore,Kcross.inhom)
importFrom(spatstat.explore,Lcross)
importFrom(spatstat.geom,ppp)
