5827bb0378bb6d9eba4f3b85679b405e *CITATION
0478a9c4316fd088efb41b3eccef738b *DESCRIPTION
73f65997005ef4c649e574b86d97768f *INDEX
10b9e4d6453c0c5f902e1af13cfb1470 *Meta/Rd.rds
cb6e0013c4ac16c15f6498224cb939fb *Meta/data.rds
dff0c21365af97a4870480e08afc2958 *Meta/features.rds
6b8b1bef995a4ca819300a1dbbb1be00 *Meta/hsearch.rds
6139a30a86d03ddac864d79a60384332 *Meta/links.rds
5e2bb8a3905954d370ef88bfc9c727ec *Meta/nsInfo.rds
424a4ccb536c46fd18c15e39355ec917 *Meta/package.rds
587f4d57a5e437719ead963e0eab0727 *Meta/vignette.rds
e46f3cc40021051b275d73664f95c325 *NAMESPACE
ff19d0f3d7b3627da6dd5d0eea0faf78 *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/R453Plus1Toolbox
9c95fbf00f5de58938997af679008a65 *R/R453Plus1Toolbox.rdb
d71ebabe38e1e486ca88d4af5991295f *R/R453Plus1Toolbox.rdx
489b186b7f6972a885de18c594e85909 *data/avaSetExample.RData
b26f9a4853b43a22c73387c7c6cd9eeb *data/avaSetFiltered.RData
c1d944b854d4b800e8a04419c164a882 *data/avaSetFiltered_annot.RData
00f66e479bf2a22e7c67895ac3e35c5e *data/breakpoints.RData
02867656f6aa4d42f525cbabd3bf17c8 *data/captureArray.RData
10ed97379a88bec5258cfc10e7c9e189 *data/mapperSetExample.RData
5a557fe7262c7119f90bcd5cb962011e *data/plotVariantsExample.RData
b77e1ac6095869851897697941a02823 *doc/index.html
b2b1e50be8ebfd6d838f93709049a4ec *doc/vignette.R
be004f03830183f688e34c1f1180628f *doc/vignette.Rnw
d4cfa6dd1915b80634156e1eef8b3948 *doc/vignette.pdf
5c6622b5d96a455a9de472480ff8f168 *extdata/AVASet/Amplicons/ProjectDef/ampliconsProject.txt
f9e763906eef2f97919ac4f794322086 *extdata/AVASet/Amplicons/Results/Align/I116/I36/I116_vs_I36.ampIds.txt
e17e6bd63e2970264d1904079f066427 *extdata/AVASet/Amplicons/Results/Align/I116/I37/I116_vs_I37.ampIds.txt
80b78bdf2a7f8f1139cac00268bf2ff5 *extdata/AVASet/Amplicons/Results/Align/I116/I40/I116_vs_I40.ampIds.txt
1aeb51619e6ca7afc923f64d9f7302e1 *extdata/AVASet/Amplicons/Results/Align/I116/I42/I116_vs_I42.ampIds.txt
1eafca9e2c3a638683c0460d0382a9f8 *extdata/AVASet/Amplicons/Results/Align/I117/I36/I117_vs_I36.ampIds.txt
bf210413caaf7a9419df8e2963975af4 *extdata/AVASet/Amplicons/Results/Align/I117/I37/I117_vs_I37.ampIds.txt
c23bc42f30b688cf4ba5caa2a5ac06f6 *extdata/AVASet/Amplicons/Results/Align/I117/I40/I117_vs_I40.ampIds.txt
6e308d49ab1298c7f1c7eac4b999a61f *extdata/AVASet/Amplicons/Results/Align/I117/I42/I117_vs_I42.ampIds.txt
8688819ae31f6f0081e4d9b505e9122d *extdata/AVASet/Amplicons/Results/Align/I118/I36/I118_vs_I36.ampIds.txt
00da7e73f4fd74e2cf72b09267283b1d *extdata/AVASet/Amplicons/Results/Align/I118/I37/I118_vs_I37.ampIds.txt
ac1a0ef2495e93115911a4eceefb5339 *extdata/AVASet/Amplicons/Results/Align/I118/I40/I118_vs_I40.ampIds.txt
fc082710ac738d02f2d202197e0499ed *extdata/AVASet/Amplicons/Results/Align/I118/I42/I118_vs_I42.ampIds.txt
351eabbfb18cd2cc7eed3a9e3f21f11d *extdata/AVASet/Amplicons/Results/Align/I9644/I36/I9644_vs_I36.ampIds.txt
121d24b7c70335c00b7ed220637e2dc2 *extdata/AVASet/Amplicons/Results/Align/I9644/I37/I9644_vs_I37.ampIds.txt
ef2122319402aad8d30da1b0552dab2c *extdata/AVASet/Amplicons/Results/Align/I9644/I40/I9644_vs_I40.ampIds.txt
77e13c09bf4125adb27b954b77c203c9 *extdata/AVASet/Amplicons/Results/Align/I9644/I42/I9644_vs_I42.ampIds.txt
cdcd883c347cd777080a19d4aa2c65d3 *extdata/AVASet/Amplicons/Results/Align/I9645/I36/I9645_vs_I36.ampIds.txt
2d620873a8819a46d8d545885033cddd *extdata/AVASet/Amplicons/Results/Align/I9645/I37/I9645_vs_I37.ampIds.txt
e8a6d900b91976e7926ca2e50c4cd60b *extdata/AVASet/Amplicons/Results/Align/I9645/I40/I9645_vs_I40.ampIds.txt
633bb52498f8d4b5b90656850bbd1e5d *extdata/AVASet/Amplicons/Results/Align/I9645/I42/I9645_vs_I42.ampIds.txt
f676b6dff2111fd80a0aed08ed179b1a *extdata/AVASet/Amplicons/Results/Align/I9646/I36/I9646_vs_I36.ampIds.txt
d9db7e5f7743f8ea294f3e01c7dbee34 *extdata/AVASet/Amplicons/Results/Align/I9646/I37/I9646_vs_I37.ampIds.txt
907a02f83e1b3b57cecace640421043d *extdata/AVASet/Amplicons/Results/Align/I9646/I37/I9646_vs_I37.readAlign.txt
20be25a1f9a3aaf7cd44e3a0c62f6690 *extdata/AVASet/Amplicons/Results/Align/I9646/I40/I9646_vs_I40.ampIds.txt
f1421bfaa9dd20742f761ed17bdb4249 *extdata/AVASet/Amplicons/Results/Align/I9646/I42/I9646_vs_I42.ampIds.txt
25732bf3ccfdcd0cd4e3af14e9814102 *extdata/AVASet/Amplicons/Results/Variants/I116/I116xI36detectedVariants.txt
8ea131293a25d17e6ccc43557279c3e7 *extdata/AVASet/Amplicons/Results/Variants/I116/I116xI37detectedVariants.txt
2a35c4b7dcfafae61ed38a475fae9855 *extdata/AVASet/Amplicons/Results/Variants/I116/I116xI40detectedVariants.txt
0da940096b6714b0e05c758e791215e7 *extdata/AVASet/Amplicons/Results/Variants/I116/I116xI42detectedVariants.txt
cffdd0027674433cdfb445377fabcf44 *extdata/AVASet/Amplicons/Results/Variants/I117/I117xI36detectedVariants.txt
4054216fe8bbe0d9b216ab863f28fcab *extdata/AVASet/Amplicons/Results/Variants/I117/I117xI37detectedVariants.txt
51ba32c77458a0923ba72f4a1ae37f2d *extdata/AVASet/Amplicons/Results/Variants/I117/I117xI40detectedVariants.txt
c0c28362fd5ba01a67b7a522ba3d4b16 *extdata/AVASet/Amplicons/Results/Variants/I117/I117xI42detectedVariants.txt
befc098b7639568e29db0bc4e4fd0604 *extdata/AVASet/Amplicons/Results/Variants/I118/I118xI36detectedVariants.txt
c226e75fa97609530a48c0d3746d9026 *extdata/AVASet/Amplicons/Results/Variants/I118/I118xI37detectedVariants.txt
e098d40aa1531ec98f227fcbd0d812b4 *extdata/AVASet/Amplicons/Results/Variants/I118/I118xI40detectedVariants.txt
c7ba99a72c8a05eb3b36180227930ad5 *extdata/AVASet/Amplicons/Results/Variants/I118/I118xI42detectedVariants.txt
9c8d77d0ce629224e01a98b6d416124f *extdata/AVASet/Amplicons/Results/Variants/I9644/I9644xI36detectedVariants.txt
b8901eb7b1a09d9762acb8b90b8a53b8 *extdata/AVASet/Amplicons/Results/Variants/I9644/I9644xI37detectedVariants.txt
36ed3ebe9c0fd92c90ef7c533fa2ee40 *extdata/AVASet/Amplicons/Results/Variants/I9644/I9644xI40detectedVariants.txt
34925a3123b8ed285551baa5f5c3b05d *extdata/AVASet/Amplicons/Results/Variants/I9644/I9644xI42detectedVariants.txt
20ab4c33306e69dac0271644807bdd5e *extdata/AVASet/Amplicons/Results/Variants/I9645/I9645xI36detectedVariants.txt
2e04015f25b47c251b5a61ae6d9a33fb *extdata/AVASet/Amplicons/Results/Variants/I9645/I9645xI37detectedVariants.txt
a9a627d3ce6061d0f156f6c08981e858 *extdata/AVASet/Amplicons/Results/Variants/I9645/I9645xI40detectedVariants.txt
875cbb84c2447d4310cd00bf4ce6ba01 *extdata/AVASet/Amplicons/Results/Variants/I9645/I9645xI42detectedVariants.txt
e4faca18d0584a695042df52fb484c19 *extdata/AVASet/Amplicons/Results/Variants/I9646/I9646xI36detectedVariants.txt
3d30342898e09cf1953ab2a0bab611e3 *extdata/AVASet/Amplicons/Results/Variants/I9646/I9646xI37detectedVariants.txt
3358f6f755f371172009592d08b23673 *extdata/AVASet/Amplicons/Results/Variants/I9646/I9646xI40detectedVariants.txt
356d22e54ecfe7315a7b990230a0263f *extdata/AVASet/Amplicons/Results/Variants/I9646/I9646xI42detectedVariants.txt
0a0f0e703a2c32804aba1910bb7abb55 *extdata/AVASet/Amplicons/Results/Variants/currentVariantDefs.txt
7d15f349a83b32d6c88c8867d7de3e86 *extdata/AVASet_doAmplicon/amp.csv
e6d26ae35b9fb30a4bdf645969335def *extdata/AVASet_doAmplicon/reference.csv
6e533ec95276db04d8d16672a03698a6 *extdata/AVASet_doAmplicon/sample.csv
b8376c2b5e4571c00bdcedc6d2044054 *extdata/AVASet_doAmplicon/variant.csv
457b889cadc492912613fe510b16c882 *extdata/AVASet_doAmplicon/variantHits.csv
a1523ebbbcd6680084ab2af418d53aac *extdata/AVAVarFreqExport/AVAVarFreqExport.xls
d6cb5df93e041924c899cffb4e351365 *extdata/MapperSet/N01/mapping/454HCDiffs.txt
cfd721cf0fbc0361b965f03431033a2e *extdata/MapperSet/N01/mapping/454NewblerMetrics.txt
0123840f6fa81284ee9ba76dc3b816be *extdata/MapperSet/N03/mapping/454HCDiffs.txt
fa1314c513425034298adbd2d14e3863 *extdata/MapperSet/N03/mapping/454NewblerMetrics.txt
6e01c28e047cebcabfe5c3679c765457 *extdata/MapperSet/N04/mapping/454HCDiffs.txt
b2ef968458efdbad265e962b05ff7f4f *extdata/MapperSet/N04/mapping/454NewblerMetrics.txt
e1933ee319d3fb952131e4940e509758 *extdata/SFF/example.sff
57c47448cef42618fd8bada3ec259e0c *extdata/SVDetection/R_2009_07_30/D_2009_07_31/1.CAT.454Reads.fna
b1de8bbbf428f9c68971ef61f6a125f4 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/1.CAT.454Reads.qual
73efee4b14e5652a6ab83269b9b9ab54 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/1.TCA.454Reads.fna
c43878f368ceeb997c9026c64fbc3f01 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/1.TCA.454Reads.qual
d8b9dfccef6810a6c931a8e84287fee7 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/2.CAT.454Reads.fna
a456eb560a86f0eb1180a13ba6ca0e38 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/2.CAT.454Reads.qual
df3ac6f6d393cc83de549f7ddb465dca *extdata/SVDetection/R_2009_07_30/D_2009_07_31/2.TCA.454Reads.fna
5be49aabadf4c811b7a1f1f502b5ea20 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/2.TCA.454Reads.qual
8db43e0e4451f5a39155ca7311e432b1 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454BaseCallerMetrics.csv
b5c28104125e75af2e4d1acdd782bba8 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454BaseCallerMetrics.txt
2598452339aeb58c15441ee7e0514349 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454DataProcessingDir.xml
1307d40d722c219eac816b4e118d9ac8 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454QualityFilterMetrics.csv
a3cc5f510eeb00cadb78a300c4c5126c *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454QualityFilterMetrics.txt
177d2fe0b330aee89997d3baf1183963 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454RuntimeMetricsAll.csv
715ed7fa09c86baa8e12515139d252a5 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/454RuntimeMetricsAll.txt
4cbd0943f5c0c5e58fa223c3e0d534ae *extdata/SVDetection/R_2009_07_30/D_2009_07_31/dataRunParams.xml
b10b1b2170b7d951d06ffdcc4d7bc2a9 *extdata/SVDetection/R_2009_07_30/D_2009_07_31/gsRunProcessor.log
aefe78f4da7adb1a866c9ebc911ae92c *extdata/SVDetection/bam/N01.bam
2e8c15949f5d8bfb778d4eaa5ab56c1c *extdata/SVDetection/chip/CaptureArray_hg19.bed
5c757aea2e94fea509af660e4a4b2039 *extdata/qualityReport.Rnw
d73a69819e9ff31a8afb5d73765220a2 *help/AnIndex
77f8c1983621b5a901c9bccc912169b2 *help/R453Plus1Toolbox.rdb
81de7f43b7a211fff39c3fe5521fd93e *help/R453Plus1Toolbox.rdx
8785b17ae2212d2f501144548d3f1426 *help/aliases.rds
7fa4f48a1118d9e3accc5892f7899a15 *help/paths.rds
4770e2f51b03e9a2e66c1b5b73f7dafe *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
b103eb1265a62f9f6a7ebf7519891ce7 *javascript/sorttable.js
b109d4f01f11b1d225d66a3adda3915a *libs/x64/R453Plus1Toolbox.dll
