91d2f9ec703c2f9870689b4e9c8ca8bb *DESCRIPTION
579c219a6c392a86ebd04596a28100ef *INDEX
e8cdfa9311a3112b558dee76acc1b008 *Meta/Rd.rds
819037a52e67fe52de1e71e910a4bcc1 *Meta/data.rds
795ef1933dd6e5a92764af4150ef47ba *Meta/features.rds
d976ab96729139982ad3ff04f3e576ac *Meta/hsearch.rds
432835c9466c7a9298c1c0670ae4b7a4 *Meta/links.rds
606c44737d5b8cb99070053485116260 *Meta/nsInfo.rds
a8773a77976e70c7e9ca994a5e4808c6 *Meta/package.rds
ac0127963376394304316f26102ddb92 *Meta/vignette.rds
6ba09c6f72f3b2870f5d25c3f4f0ba56 *NAMESPACE
bb4b6ab03eb518c40a18d9d6e1aa9e70 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/spatialHeatmap
fd1359249dd4bd733890b54f6a988ab8 *R/spatialHeatmap.rdb
b0a412442db500378cf87be6e411e337 *R/spatialHeatmap.rdx
8a1c5f7cbf2b5e7008daf11b9baf8327 *data/aSVG.remote.repo.rda
2959816a6ecf444702469671e9fc0fb3 *data/deg.table.rda
02c0c1b8ec8ccad67fccca439971df2c *data/lis.deg.up.down.rda
96b375ea156ab1867dafb0d67a4f9dcc *doc/covisualize.R
ad56ca9c3e06b7782bfabd96df02bbff *doc/covisualize.Rmd
306c8fd608bf12912d433c8173c8ae1e *doc/covisualize.html
9ed4b9ebfa2401bdf4d57d9a8c72d56a *doc/index.html
8fcaefda7951f8d106c89b9ca9c31d6e *doc/spatialHeatmap.R
b2f16b8beaf05cdcc0b546a731f3eaaa *doc/spatialHeatmap.Rmd
2e22a41157fa27268bde226374c3fb03 *doc/spatialHeatmap.html
b42854e7a087b86ffd55ed23544c525c *extdata/cocluster/data/bulk_cocluster.rds
b9f2c9437ae82b68c7e0ae192e7b4033 *extdata/cocluster/data/sc10_cocluster.rds
5febddbff0e70a15b9afa2c5ec7f6a93 *extdata/cocluster/data/sc11_cocluster.rds
c58838ac7c03f9e34a293bb69175d7c4 *extdata/cocluster/data/true_match_arab_root_cocluster.txt
4ee7741409ef0bca96b119444f1879bd *extdata/cocluster/slurm.tmpl
dbdac700e1f1d5915e772259c07e179b *extdata/cocluster/true_match_mouse_kidney_cocluster.txt
53e2533f5f386f031d5f87b8dd99da48 *extdata/shinyApp/R/covis_auto_server.R
1bff7b1f6c5b13bbdc1bacd1b7db7b27 *extdata/shinyApp/R/covis_auto_ui.R
9d27087821ab9ed8b83b2218aadbd322 *extdata/shinyApp/R/covis_man_server.R
59e6c4e8b9b91c106b379988a80aaf7a *extdata/shinyApp/R/covis_man_ui.R
7a78b27cfe8b494a708dca6b32c9d64a *extdata/shinyApp/R/data_server.R
3546a3ee282f74d75c616f4ae1fc4da3 *extdata/shinyApp/R/data_ui.R
386ad244855737ae410ad95abcf40831 *extdata/shinyApp/R/deg_server.R
babe3ceaffb808765ac7fccc65481400 *extdata/shinyApp/R/deg_ui.R
fb3f66b2a17d01b8359fd8522c236dbb *extdata/shinyApp/R/desired_bulk_server.R
8fa588666d05abe3e78c3d0e27e794e4 *extdata/shinyApp/R/desired_bulk_ui.R
c2a0838a86491f6b80932ad586859d47 *extdata/shinyApp/R/dim_server.R
081c0ef4984db93bb84e45b9129d8117 *extdata/shinyApp/R/dim_ui.R
38615a83233be7f366ef5b55fd569709 *extdata/shinyApp/R/global.R
cb73a7bae3db8ce8817df248f4506e50 *extdata/shinyApp/R/match_server.R
6d576691f13712e208310bba8d587c5b *extdata/shinyApp/R/match_ui.R
e3612f1e88dc6970b0e2e126065ebb73 *extdata/shinyApp/R/network_server.R
e8f5cafd1f69bdc71fa84e713e225a88 *extdata/shinyApp/R/network_ui.R
09295a77699320437b61ba2f9c5f59f2 *extdata/shinyApp/R/radioTooltip.R
4695caf06aeb9cc1c75afbd103469ce2 *extdata/shinyApp/R/scell_server.R
904bed784aa8df0fd9dd25160e4c8dad *extdata/shinyApp/R/scell_ui.R
16b6250afe3ab34f9bf74e7c69966ca6 *extdata/shinyApp/R/search_server.R
61453c9f3492ec0b7ed47d522beca0a7 *extdata/shinyApp/R/search_ui.R
4cc336f4fba6370cba80c26658911a49 *extdata/shinyApp/R/server.R
636731904e251a9dcf3f530e5acadd86 *extdata/shinyApp/R/shm_server.R
cc9c6da11d43cbcd66aa20597b74f77a *extdata/shinyApp/R/shm_ui.R
d1f89619b150ec1f6776a1f3138630c4 *extdata/shinyApp/R/tailor_match_server.R
f08f596b89b9ec00d7903dde4d07d194 *extdata/shinyApp/R/tailor_match_ui.R
3c158c754746fa272b0f42ad800dddde *extdata/shinyApp/R/ui.R
4edd511e9e80b0974c69f3b275b9a037 *extdata/shinyApp/R/upload_server.R
82effd885aca71f665bafeec1b6759a5 *extdata/shinyApp/R/upload_ui.R
27c09b609035b3b30e55226e602cbe38 *extdata/shinyApp/app.R
ed334f668ea91f48442b0b72fe2ba9bc *extdata/shinyApp/bookmarks.db
5ed2461987e6f30dc05343f128d30c4b *extdata/shinyApp/config/config.yaml
d41d8cd98f00b204e9800998ecf8427e *extdata/shinyApp/config/dummyfile
c385e9fef48813c58d7fedd6bebe4e8e *extdata/shinyApp/desired_bulk_app.R
7d187f51df03bbca5a3ead4ab6432a08 *extdata/shinyApp/example/aSVGs_shm.tar
5239b52def9924f1716bc7101ddd42ba *extdata/shinyApp/example/arabidopsis.thaliana_organ_shm.svg
933c3ea2c4509fce723faa38b88a1ca5 *extdata/shinyApp/example/arabidopsis.thaliana_organ_shm1.svg
4fa1b93920599a491ba456a592aad748 *extdata/shinyApp/example/arabidopsis.thaliana_organ_shm2.svg
38c71c5d93f1bcc47c1df95232df842e *extdata/shinyApp/example/arabidopsis.thaliana_root.cross_shm.svg
02c6a747be9d49ab0298ba9ea60cdd63 *extdata/shinyApp/example/arabidopsis.thaliana_root.ebi_shm.svg
6c5051411f4f5c1b1938225a0e35f187 *extdata/shinyApp/example/arabidopsis.thaliana_root.roottip_shm.svg
1c11783d31f8057c248a04b7c9710fbe *extdata/shinyApp/example/arabidopsis.thaliana_shoot.root_shm.svg
5cb878e669c5b61664f752ad472285bb *extdata/shinyApp/example/arabidopsis.thaliana_shoot_shm.svg
3cd0bcbf09d89f7bedec20da760a5acc *extdata/shinyApp/example/bulk_mouse_cocluster.rds
144dc3e01e20910dc649647432e20b8c *extdata/shinyApp/example/bulk_mouse_cocluster.txt
67895bd63bf3c9faa413cf1210f12d80 *extdata/shinyApp/example/cell_mouse_brain.rds
5ba702aac0f6ac25e9371644970edc6a *extdata/shinyApp/example/cell_mouse_cocluster.rds
85a11f27be614f3d23523e7d6fb9da5a *extdata/shinyApp/example/cell_mouse_cocluster.txt
6c93dae6ea058b112a85ac703f222e58 *extdata/shinyApp/example/count_chicken.txt
5956654c78624f1d302579e41c7dfa6c *extdata/shinyApp/example/count_chicken_simple.txt
3d9b7da69dd26d51a2835360b9d71962 *extdata/shinyApp/example/dat_overlay.txt
fa14ead9ef62089166c90763f33883ec *extdata/shinyApp/example/data_shm.tar
d41d8cd98f00b204e9800998ecf8427e *extdata/shinyApp/example/dummyfile
6f94d4273ff941ecd73a848a820f3149 *extdata/shinyApp/example/expr_arab.txt
97e6835fe69fbc97563f27d8f4a45759 *extdata/shinyApp/example/expr_chicken.txt
7a574adb631bb3f6837e56ccb1783c46 *extdata/shinyApp/example/expr_human.txt
6e8239f71945e50e340ae9b3a4be4f10 *extdata/shinyApp/example/expr_mouse.txt
4ed821f612f2bb7b5f52c6984ac0a9bd *extdata/shinyApp/example/gallus_gallus.svg
f21e154dd1c13e999f9cf8486e48c068 *extdata/shinyApp/example/homo.sapiens_brain.shiny_shm.svg
f99a164862a5e909613d47b610918cd6 *extdata/shinyApp/example/homo_sapiens.brain.svg
24a8067eee6e6a74f5480c1aa3254037 *extdata/shinyApp/example/maize_leaf_shm1.png
26aad4bc6ff43798eb5fe672162d3f95 *extdata/shinyApp/example/maize_leaf_shm1.svg
ed2b0cac8304d23221cd3371e937c21b *extdata/shinyApp/example/maize_leaf_shm2.png
a0ca26bcdd75c38b385a5ce15d979371 *extdata/shinyApp/example/maize_leaf_shm2.svg
6c0ff5059998e7521d1f3272b1846f2d *extdata/shinyApp/example/manual_cluster_mouse_brain.txt
6b81f3461a4d03991b75632264f9fa1d *extdata/shinyApp/example/match_mouse_brain_cocluster.txt
a4827f43ec4308a5315fb54b48f60f6a *extdata/shinyApp/example/mus_brain_vars.txt
5d0614d07ac80baacd600b94b72bcf1d *extdata/shinyApp/example/mus_brain_vars_se.rds
917af679895ad3599a7caf82d0f1e377 *extdata/shinyApp/example/mus_musculus.brain.svg
15f3862fb907edd03bde245969f567a2 *extdata/shinyApp/example/mus_musculus.male.svg
ed56f7f2b803925d09cafa7a3537d50c *extdata/shinyApp/example/random_data_multiple_aSVGs.txt
e0f93365916405ea6f38e4f0668f6e61 *extdata/shinyApp/example/selected_cells_with_desired_bulk.txt
111d0b4889080bd8683eef08cf9a7963 *extdata/shinyApp/example/shiny_covis_bulk_cell_mouse_brain.rds
31bd1b49bf7ebc0c394e9710085525e8 *extdata/shinyApp/example/target_arab.txt
e924caeacfca178777c28e47e0f4abdc *extdata/shinyApp/example/target_chicken.txt
94589aa41115ec6e29c0347990830166 *extdata/shinyApp/example/target_human.txt
6055fc71d5eb0472d8edf70e9a4b7402 *extdata/shinyApp/example/target_mouse.txt
08a5092feabbd97483b7c0bdce3d50a2 *extdata/shinyApp/example/true_match_mouse_brain_cocluster.txt
1fd48ba36fd23068c517e1f179995835 *extdata/shinyApp/html_shm/README.txt
3435386201959b2a15f6a3de2e7aaf6c *extdata/shinyApp/instruction/about.Rmd
ff2f3e07d13e6544612334524a524c59 *extdata/shinyApp/instruction/about.html
7c52d2f3e5d09c99dac48376b3796e7c *extdata/shinyApp/instruction/acknowledgement.html
f4fb84faa80b32505719539e401cd182 *extdata/shinyApp/instruction/bibtex.bib
e317f7fb8163b4689cf73b737609e20f *extdata/shinyApp/instruction/data_matrix.html
64659980982aa8834a99f10633a8c538 *extdata/shinyApp/instruction/download.html
d9e8bcc47897dc4f965a889a20525182 *extdata/shinyApp/instruction/input.html
17994f6e26be93c9e87a92097c9aca6e *extdata/shinyApp/instruction/matrix_heatmap.html
c859a45cf4f0d91b6ee0632eeab59054 *extdata/shinyApp/instruction/network.html
2e414fce2a2b14ae11c674a15f8ac3ee *extdata/shinyApp/instruction/spatial_heatmap.html
1a5497298aac83555039d9dc5e4c0251 *extdata/shinyApp/instruction/summary.html
1a2b1a82205edd97562e24499712465d *extdata/shinyApp/www/ggly/README.txt
f4ef38b1d67277f160f2d616124a3032 *extdata/shinyApp/www/image/brain_hum.png
875b28a5b1641265ecf34b566c7f7990 *extdata/shinyApp/www/image/chicken.png
a391706960aee7642f2117e0cf6d5e7c *extdata/shinyApp/www/image/data_format_shiny.jpg
33b7c592e87a16fab3ea1cfe581c2c06 *extdata/shinyApp/www/image/data_svg.png
cec181f15a1276fda193577e32a2db1d *extdata/shinyApp/www/image/mouse.png
54c7ef79ef21f91b2244ee82b854a611 *extdata/shinyApp/www/image/mus_multi_dim.png
19883b2747d894a4ea81d2a87cc051c4 *extdata/shinyApp/www/image/organ_arab.png
f373cf877680b72ba4d80f512a506e8c *extdata/shinyApp/www/image/root_arab.png
59f4ff42985bcefbf5152e13663f2ef4 *extdata/shinyApp/www/image/shoot_arab.png
8f2996744f49513088149387f69d8aca *extdata/shinyApp/www/image/stage_arab.png
b585fe0a9bf1fd11176c9b54c34d973c *extdata/shinyApp/www/javascript.js
12bb0c923ec8ba64bee8e60a1d01fcaf *extdata/shinyApp/www/style.css
362bfc5a36ba5a65352e45b3961daa99 *extdata/shinyApp/www/three_lines.png
d41d8cd98f00b204e9800998ecf8427e *extdata/shinyApp/www/video/dummyfile
134b319a25fef754e10a6b5dfdd7e8d7 *help/AnIndex
df57e8bc5544a710e5de8c63f255b3b7 *help/aliases.rds
556b9ad7e97db6bd462bb88ac1a6447c *help/paths.rds
0c7fd3a970ecef6fdfece0bc0db2a38d *help/spatialHeatmap.rdb
c2874aa0a95c063a8f95a23f0406983c *help/spatialHeatmap.rdx
52a754d68ed80eb642a15ca9156a1d75 *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
8f0a2b1e5f4e6f69c63bf21fde554aff *script/cocluster.R
8eb7d1b8992ced755f2fc2fb04256e67 *script/fun_cocluster.R
3a49959dd3de8b28c8e49044b4ec40b6 *script/target_expr.R
a2c8a4d78aa542ddc6c427c28cb7b5d1 *unitTests/test_adj_mod.R
e21b27a3a1cb4526d72565b8fa8d7d33 *unitTests/test_filter_data.R
