aaa
al
allcoef
analysisType
annotFile
assayFile
bam
BioC
bioconductor
biomarker
Biomarker
biomarkerName
bootswatch
codecov
coef
cohen's
colData
ComBat
ComBatSCE
compbiomed
ComplexHeatmap
controlLevel
cytokine
DataFrame
depthResolution
DESeq
diffex
DOI
downsampling
eg
enrichR
enrichRSCE
entrez
Entrez
equalvar
et
expressionCutoff
fastq
fdr
fullreduced
genelist
geneList
generateSimulatedData
getBiomarker
getPCA
getTSNE
ggplot
GSE
gsva
GSVA
gsvaPlot
gsvaSCE
GTF
gz
Hs
indexPath
inputfile
isSpike
KEGG
levelofinterest
lifecycle
limma
Limma
logcounts
logfold
MAITs
MAITS
MASTregression
MASTviolin
maxReadDepth
mediansignificant
microglia
MSigDB
Mucosal
ntop
oligodendrocytes
outputDir
pathwayNames
pathwaySource
pcaVariances
plotBatchVariance
plotPCA
plotTSNE
proteasome
PROTEASOME
reducedDim
reducedDimName
reducedDims
removeNoExpress
repo
rowData
Rstudio
Rsubread
saturations
saveBam
saveBiomarkerRes
saveCountFiles
saveDiffExResults
SCE
SCEsetObject
scRNA
SCTK
SCtkE
SCtkExperiment
SCTKExperiment
SingleCellExperiment
SNE
subDiffEx
subDiffExANOVA
subDiffExttest
SummarizedExperiment
summarizeTable
thresholdGenes
thresholdSCRNACountMatrix
tpm
tSNE
UI
UMAP
visPlot
Zeisel
