# Generated by roxygen2: do not edit by hand

S3method("[",Set)
S3method(print,verCHI)
export("features<-")
export("samples<-")
export(bSet)
export(clean_analytes)
export(cluster_jsd)
export(coExpress)
export(corr)
export(dist_jsd)
export(enterotyping)
export(estimate_k)
export(features)
export(mSet)
export(plot_network)
export(samples)
exportClasses(Set)
exportClasses(bSet)
exportClasses(mSet)
exportClasses(vmh)
exportMethods(ncol)
exportMethods(nrow)
exportMethods(show)
import(data.table)
importClassesFrom(data.table,data.table)
importFrom(WGCNA,blockwiseModules)
importFrom(WGCNA,cor)
importFrom(WGCNA,goodSamplesGenes)
importFrom(WGCNA,labels2colors)
importFrom(WGCNA,pickSoftThreshold)
importFrom(WGCNA,plotDendroAndColors)
importFrom(data.table,tstrsplit)
importFrom(doParallel,registerDoParallel)
importFrom(graphics,abline)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(graphics,text)
importFrom(igraph,"V<-")
importFrom(igraph,V)
importFrom(igraph,degree)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,layout_with_kk)
importFrom(igraph,plot.igraph)
importFrom(methods,new)
importFrom(methods,show)
importFrom(methods,validObject)
importFrom(parallel,clusterEvalQ)
importFrom(parallel,clusterExport)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
importFrom(psych,corr.test)
importFrom(stats,p.adjust)
importFrom(stats,quantile)
importFrom(stats,setNames)
importFrom(visNetwork,toVisNetworkData)
importFrom(visNetwork,visGroups)
importFrom(visNetwork,visIgraphLayout)
importFrom(visNetwork,visLegend)
importFrom(visNetwork,visNetwork)
