Set-class               Set
[.Set                   subset_Set
bSet                    bSet
bSet-class              bSet
clean_analytes          clean_analytes
cluster_jsd             cluster_jsd
coExpress               coExpress
coExpress,Set-method    coExpress
cor2df                  cor2df
corr                    corr
corr,mSet,bSet-method   corr
dist_jsd                dist_jsd Calculating Jensen-Shannon divergence
                        basing the formulate JSD(P || Q) = sqrt{0.5
                        \times KLD (P||\frac{P + Q}{2}) + 0.5 \times
                        KLD(Q||\frac{P+Q}{2})} .
enterotyping            enterotyping
estimate_k              estimate_k
features                features
mSet                    mSet
mSet-class              mSet
mb_initialize           mb_initialize initialized function for 'mSet'
                        and 'bSet' classs.
ncol,Set-method         ncol
nrow,Set-method         nrow
pickST                  pickST
plot_coExpress          plot_coExpress
plot_network            plot_network
print.verCHI            print.verCHI
quiteRun                quiteRun Run expression in quite mode.
samples                 samples
show,Set-method         show
vmh-class               vmh
