.get_correlates         .get_correlates
.plot_one_interaction   Network visualization
discretize              Set the discretized expression attribute Uses
                        the discretize_exprs function of the FCBF
                        package
fc                      Example fcoex object
fcoex-class             An S4 class to represent the fcoex analysis.
find_cbf_modules        find_cbf_modules
get_nets                Network visualization
idents                  Retrieves module identities from the recluster
                        function
mini_pbmc3k             Processed subset of the pbmc3k dataset from
                        PBMC genomics
mod_colors              Set module colors mod_colors attribute
mod_gene_num            Get the number of genes in modules in a fcoex
                        object This function was copied and adapted
                        from the CEMiTool package.
mod_names               Get module names in a fcoex object
mod_ora                 Over Representation Analysis (ORA)
module_genes            Get the module genes in a fcoex object
new_fcoex               Create a fcoex object
nmodules                Get the number of modules in a fcoex object
ora_data                Retrieve over representation analysis (ORA)
                        results
plot_ora                ORA visualization
recluster               Recluster cells based on fcoex module
                        composition
save_plots              Save fcoex object plots
show,fcoex-method       Print a fcoex object
show_net                Retrieve fcoex net plots
show_ora                Retrieve fcoex ora plots
