97d1cb27e8478d7ae4de59a2de8c86e7 *CITATION
875b7ea82396614e27c384aa13c5f9ba *DESCRIPTION
82aad66b16517c9991aa8cae64982337 *INDEX
5cf654eed2a5824235471daf77187792 *Meta/Rd.rds
26a2f39f4241469f42c11840c0da5d6c *Meta/data.rds
795ef1933dd6e5a92764af4150ef47ba *Meta/features.rds
567a023b3eff220e426ef939cbe3cb99 *Meta/hsearch.rds
647eeca648fc72de2ac7ce95d1716c6f *Meta/links.rds
4dd638b1b90e592ceb8dc165b974b536 *Meta/nsInfo.rds
d20a801d4e8be8ddd6663a7f27480f33 *Meta/package.rds
49505fba2b06471e85033026d1b0facc *Meta/vignette.rds
e096c80e50b90520bbd9b8ac19805a4c *NAMESPACE
22cb13d61ad7ff19b6188aec288f2a93 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/deepSNV
63b0e55346673a795d003bbca9c78396 *R/deepSNV.rdb
7c800c3898088b552afd935b143fc710 *R/deepSNV.rdx
eb93e43e868cf6b00523766e2093961c *TODO
3ccecc236923abcec5bf3979f95058ec *data/HIVmix.RData
e5e59d311d41716d436bda6c12d6b6f8 *data/RCC.RData
44fe941582b98ed2fb74a2ff43bd04dc *data/counts.RData
8f473e99da6aea7893fbf4f0967161a5 *data/phiX.RData
39946182d2a7087db51be00e27bfe68e *data/pi.RData
a198b59b439c25594d85e0f8c8afc300 *data/trueSNVs.RData
b668e30fc1bc1b8c1f60ad1dbaff8772 *doc/deepSNV.R
79ea907278cca8011a87b7954bfc02ce *doc/deepSNV.Rnw
2e7112755b3abc2974d1376d0bc6996e *doc/deepSNV.pdf
4b2927b828f8ee737c8d65c1933a95ad *doc/index.html
92e9aece07ac3612437ffc3be5c5823f *doc/shearwater.R
fc4e56aed626edbec5e35a7c0ac725b0 *doc/shearwater.Rnw
620858ad6d2266632ed994056402122c *doc/shearwater.pdf
b17ebdace526e32bc2eaa51e7361ade4 *doc/shearwaterML.R
866271256074ead132c1e1225b663bac *doc/shearwaterML.Rmd
15016415cca1c49a634c3e8b578dde80 *doc/shearwaterML.html
03adcf464008b8e2642cdb62807764d3 *example/deepSNV-example.R
f3dd841413d42161102b4b371b8b8e8f *example/shearwater-example.R
62e3352bca95588f9d1478ae36f1ed83 *extdata/control.bam
a3507164d703e922651e0e56236bc293 *extdata/control.bam.bai
9f9a82a95852ae5a1150280604b78693 *extdata/deepSNV.vcf
a04b4031bdc04278cb65173c35999698 *extdata/shearwater.vcf
726e8a03994c95b6598305bedf578845 *extdata/shearwater2.vcf
974e693f6dd19be388650d9ef95edb2c *extdata/shearwaterML.vcf
6af3a3077f6d4ab936e1bb777ad8e910 *extdata/test.bam
74ceb014e38fe7f5111bc9d501889a5e *extdata/test.bam.bai
2df1a587bda6e4c60cc283dfd468cbaa *help/AnIndex
974c3c4c3e9e5676abc43875a70d8674 *help/aliases.rds
3dfa8d4a95eb4d69a2706bf005279764 *help/deepSNV.rdb
afe593a0cd47c56c5087c462c7a87ba5 *help/deepSNV.rdx
35c0d6a877e4e93197e5b0bb0715fa9a *help/paths.rds
f7f2f00a06dd637e5fc5b5c1a1b7bda4 *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
8fd6d7a593e7fba00c4505b3d59a9c6f *libs/x64/deepSNV.dll
