# Image processing and analysis toolbox for R

## Documentation for package ‘EBImage’ version 4.40.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

A B C D E F G H I L M N O P Q R S T U W Z misc

## -- A --

abind | Combine Image Arrays
abind-method | Combine Image Arrays
abind-methods | Combine Image Arrays
affine | Spatial linear transformations
animate | Defunct functions in package 'EBImage'
as.array.Image | Image class
as.Image | Image class
as.raster.Image | Image class

## -- B --

blackTopHat | Perform morphological operations on images
blackTopHatGreyScale | Defunct functions in package 'EBImage'
blur | Defunct functions in package 'EBImage'
bwlabel | Binary segmentation

## -- C --

channel | Color and image color mode conversions
clahe | Contrast Limited Adaptive Histogram Equalization
closing | Perform morphological operations on images
closingGreyScale | Defunct functions in package 'EBImage'
cmoments | Defunct functions in package 'EBImage'
Color | Image class
colorLabels | Color Code Labels
colormap | Map a Greyscale Image to Color
colorMode | Image class
colormode | Image class
colorMode<- | Image class
combine | Combine images
combine-method | Combine images
computeFeatures | Compute object features
computeFeatures.basic | Compute object features
computeFeatures.haralick | Compute object features
computeFeatures.moment | Compute object features
computeFeatures.shape | Compute object features

## -- D --

dilate | Perform morphological operations on images
dilateGreyScale | Defunct functions in package 'EBImage'
display | Image Display
display-shiny | Shiny Bindings for display
displayOutput | Shiny Bindings for display
distmap | Distance map transform
drawCircle | Draw a circle on an image.
drawfont | Defunct functions in package 'EBImage'
drawtext | Defunct functions in package 'EBImage'

## -- E --

EBImage | Package overview
EBImage-defunct | Defunct functions in package 'EBImage'
edgeFeatures | Defunct functions in package 'EBImage'
edgeProfile | Defunct functions in package 'EBImage'
equalize | Histogram Equalization
erode | Perform morphological operations on images
erodeGreyScale | Defunct functions in package 'EBImage'

## -- F --

fillHull | Fill holes in objects
filter2 | 2D Convolution Filter
flip | Spatial linear transformations
floodFill | Region filling
flop | Spatial linear transformations

## -- G --

gblob | Compute object features
gblur | Low-pass Gaussian filter
getFeatures | Defunct functions in package 'EBImage'
getFrame | Image class
getFrames | Image class
getNumberOfFrames | Defunct functions in package 'EBImage'
Grayscale | Image class

## -- H --

haralickFeatures | Defunct functions in package 'EBImage'
haralickMatrix | Defunct functions in package 'EBImage'
hist-method | Image class
hullFeatures | Defunct functions in package 'EBImage'

## -- I --

Image | Image class
Image-class | Image class
image-method | Image class
imageData | Image class
imageData<- | Image class
is.Image | Image class

## -- L --

localCurvature | Local Curvature
log-method | Image class

## -- M --

makeBrush | Perform morphological operations on images
Math2-method | Image class
median.Image | Image class
medianFilter | 2D constant time median filtering
moments | Defunct functions in package 'EBImage'

## -- N --

normalize | Intensity values linear scaling
normalize-method | Intensity values linear scaling
numberOfFrames | Image class

## -- O --

ocontour | Oriented contours
opening | Perform morphological operations on images
openingGreyScale | Defunct functions in package 'EBImage'
Ops-method | Image class
otsu | Calculate Otsu's threshold

## -- P --

paintObjects | Mark objects in images
plot.Image | Image Display
print.Image | Image class
propagate | Voronoi-based segmentation on image manifolds

## -- Q --

quantile.Image | Image class

## -- R --

readImage | Image I/O
reenumerate | Object removal and re-indexation
renderDisplay | Shiny Bindings for display
resize | Spatial linear transformations
rgbImage | Color and image color mode conversions
rmObjects | Object removal and re-indexation
rmoments | Defunct functions in package 'EBImage'
rotate | Spatial linear transformations

## -- S --

selfComplementaryTopHat | Perform morphological operations on images
selfcomplementaryTopHatGreyScale | Defunct functions in package 'EBImage'
show-method | Image class
smoments | Defunct functions in package 'EBImage'
stackObjects | Places detected objects into an image stack
standardExpandRef | Compute object features

## -- T --

thresh | Adaptive thresholding
tile | Tiling/untiling images
toRGB | Color and image color mode conversions
translate | Spatial linear transformations
transpose | Image Transposition

## -- U --

untile | Tiling/untiling images

## -- W --

watershed | Watershed transformation and watershed based object detection
whiteTopHat | Perform morphological operations on images
whiteTopHatGreyScale | Defunct functions in package 'EBImage'
writeImage | Image I/O

## -- Z --

zernikeMoments | Defunct functions in package 'EBImage'

## -- misc --

[-method | Image class