exportPattern("^[[:alpha:]]+")
import(methods)
import(limma)
import(Gviz)
import(GenomicRanges)
import(GenomeInfoDb)
import(bsseq)
import(DSS)
import(IRanges)
import(SummarizedExperiment)
import(ExperimentHub)
importFrom("plyr", rbind.fill)
importFrom("graphics", plot)
importFrom("S4Vectors", subjectHits)
importFrom("stats", approx, p.adjust, pchisq, pnorm, qnorm)
importFrom("edgeR", modelMatrixMeth)
importFrom("utils", data)
importFrom("minfi", detectionP, preprocessFunnorm, getM, makeGenomicRatioSetFromMatrix, getBeta, getAnnotation, ilogit2)
importFrom("missMethyl", goregion, varFit, contrasts.varFit, topVar)
export(dmrcate)
exportMethods(
	cpg.annotate, 
	sequencing.annotate,
	rmSNPandCH, 
	DMR.plot,
	extractRanges,
	changeFDR
	)
