ERCC.cotan              COTAN object
ERCCraw                 Raw ERCC dataset
add.row.to.meta         add.row.to.meta
automatic.COTAN.object.creation
                        automatic.COTAN.object.creation
clean                   clean
cotan_analysis          cotan_analysis
drop.genes.cells        drop.genes.cells
est.min.parameters      est.min.parameters
extract.coex            extract.coex
fun_linear              fun_linear
get.GDI                 get.GDI
get.a                   get.a
get.cell.number         get.cell.number
get.cell.size           get.cell.size
get.coex                get.coex
get.constitutive.genes
                        get.constitutive.genes This function return the
                        genes expressed in all cells in the dataset.
get.expected.ct         get.expected.ct
get.gene.coexpression.space
                        get.gene.coexpression.space
get.genes               get.genes
get.lambda              get.lambda
get.metadata            get.metadata
get.normdata            get.normdata
get.nu                  get.nu
get.observed.ct         get.observed.ct
get.pval                get.pval
get.rawdata             get.rawdata
get.subset              get.subset
initRaw                 initRaw
mat2vec_rfast           mat2vec_rfast
plot_GDI                plot_GDI
plot_general.heatmap    plot_general.heatmap
plot_heatmap            plot_heatmap
raw.dataset             Raw sample dataset
scCOTAN-class           scCOTAN-class
vec2mat_rfast           vec2mat_rfast
