Package: csaw
Version: 1.32.0
Date: 2022-05-05
Title: ChIP-Seq Analysis with Windows
Authors@R: 
    c(person("Aaron", "Lun", role=c("aut", "cre"), email = "infinite.monkeys.with.keyboards@gmail.com"),
    person("Gordon", "Smyth", role="aut"))
Depends: R (>= 3.5.0), GenomicRanges, SummarizedExperiment
Imports: Rcpp, Matrix, BiocGenerics, Rsamtools, edgeR, limma, methods,
        S4Vectors, IRanges, GenomeInfoDb, stats, BiocParallel, metapod,
        utils
Suggests: AnnotationDbi, org.Mm.eg.db,
        TxDb.Mmusculus.UCSC.mm10.knownGene, testthat, GenomicFeatures,
        GenomicAlignments, knitr, BiocStyle, rmarkdown, BiocManager
LinkingTo: Rhtslib, zlibbioc, Rcpp
biocViews: MultipleComparison, ChIPSeq, Normalization, Sequencing,
        Coverage, Genetics, Annotation, DifferentialPeakCalling
Description: 
    Detection of differentially bound regions in ChIP-seq data with sliding windows,
    with methods for normalization and proper FDR control.
License: GPL-3
NeedsCompilation: yes
SystemRequirements: C++11, GNU make
VignetteBuilder: knitr
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/csaw
git_branch: RELEASE_3_16
git_last_commit: 7ab51d6
git_last_commit_date: 2022-11-01
Date/Publication: 2022-11-01
Packaged: 2022-11-01 21:21:59 UTC; biocbuild
Author: Aaron Lun [aut, cre],
  Gordon Smyth [aut]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
Built: R 4.2.1; x86_64-apple-darwin17.0; 2022-11-02 04:25:52 UTC; unix
