.calculatePowerPTM	dot-calculatePowerPTM
.fixTerminus	dot-fixTerminus
.getNumSamplePTM	dot-getNumSamplePTM
.joinFasta	dot-joinFasta
.locateSites	dot-locateSites
.removeCutoffSites	dot-removeCutoffSites
annotSite	annotSite
dataProcessPlotsPTM	dataProcessPlotsPTM
dataSummarizationPTM	dataSummarizationPTM
dataSummarizationPTM_TMT	dataSummarizationPTM_TMT
designSampleSizePTM	designSampleSizePTM
groupComparisonPlotsPTM	groupComparisonPlotsPTM
groupComparisonPTM	groupComparisonPTM
locateMod	locateMod
locatePTM	locatePTM
MaxQtoMSstatsPTMFormat	MaxQtoMSstatsPTMFormat
MSstatsPTM	MSstatsPTM
MSstatsPTMSiteLocator	MSstatsPTMSiteLocator
PDtoMSstatsPTMFormat	PDtoMSstatsPTMFormat
PhilosophertoMSstatsPTMFormat	PhilosophertoMSstatsPTMFormat
ProgenesistoMSstatsPTMFormat	ProgenesistoMSstatsPTMFormat
PStoMSstatsPTMFormat	PStoMSstatsPTMFormat
raw.input	raw.input
raw.input.tmt	raw.input.tmt
SkylinetoMSstatsPTMFormat	SkylinetoMSstatsPTMFormat
SpectronauttoMSstatsPTMFormat	SpectronauttoMSstatsPTMFormat
summary.data	summary.data
summary.data.tmt	summary.data.tmt
tidyFasta	tidyFasta
