preprocessCore

DOI: 10.18129/B9.bioc.preprocessCore    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see preprocessCore.

A collection of pre-processing functions

Bioconductor version: 3.15

A library of core preprocessing routines.

Author: Ben Bolstad <bmb at bmbolstad.com>

Maintainer: Ben Bolstad <bmb at bmbolstad.com>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("preprocessCore")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Infrastructure, Software
Version	1.58.0
In Bioconductor since	BioC 2.1 (R-2.6) (15 years)
License	LGPL (>= 2)
Depends
Imports	stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL	https://github.com/bmbolstad/preprocessCore
Depends On Me	affyPLM, AgiMicroRna, cqn, crlmm, RefPlus, SCATE
Imports Me	affy, BloodGen3Module, bnbc, ChAMP, cn.farms, EMDomics, ENmix, ExiMiR, fastLiquidAssociation, frma, frmaTools, GSE13015, hipathia, iCheck, ImmuneSpaceR, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, proBatch, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn
Suggests Me	DAPAR, MsCoreUtils, multiClust, QFeatures, scp, splatter, wateRmelon
Links To Me	affy, affyPLM, crlmm, oligo
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	preprocessCore_1.58.0.tar.gz
Windows Binary	preprocessCore_1.58.0.zip
macOS Binary (x86_64)	preprocessCore_1.58.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/preprocessCore
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/preprocessCore
Package Short Url	https://bioconductor.org/packages/preprocessCore/
Package Downloads Report	Download Stats