Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format


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Documentation for package ‘MSstatsConvert’ version 1.6.0

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.cleanRawPD Clean raw Proteome Discoverer data
as.data.frame.MSstatsValidated Convert output of converters to data.frame
as.data.table.MSstatsValidated Convert output of converters to data.table
getInputFile Get one of files contained in an instance of 'MSstatsInputFiles' class.
getInputFile-method Get one of files contained in an instance of 'MSstatsInputFiles' class.
MSstatsBalancedDesign Creates balanced design by removing overlapping fractions and filling incomplete rows
MSstatsClean Clean files generated by a signal processing tools.
MSstatsClean-method Clean files generated by a signal processing tools.
MSstatsConvert MSstatsConvert: An R Package to Convert Data from Mass Spectrometry Signal Processing Tools to MSstats Format
MSstatsImport Import files from signal processing tools.
MSstatsLogsSettings Set how MSstats will log information from data processing
MSstatsMakeAnnotation Create annotation
MSstatsPreprocess Preprocess outputs from MS signal processing tools for analysis with MSstats
MSstatsSaveSessionInfo Save session information